{
  "_id": "6ad496e2dc7ca4d810c6d577",
  "Package": "canregtools",
  "Title": "Analyzing Population-Based Cancer Registry Data",
  "Version": "0.2.11",
  "Authors@R": "person(\"Qiong\", \"Chen\", email = \"chenq08@126.com\",\nrole = c(\"aut\", \"cre\", \"cph\"),\ncomment = c(\nORCID = \"0000-0003-2401-0046\",\naffiliation = \"Department of Cancer Epidemiology, The Affiliated Cancer Hospital of Zhengzhou University & Henan Cancer Hospital, Henan Cancer Registry in China\"\n))",
  "Description": "Provides tools for working with Population-Based Cancer\nRegistry (PBCR) data, including cleaning, restructuring,\nclassification, summary tabulation, rate estimation,\nage-standardization, quality assessment, visualization, and\nreport preparation. It supports routine cancer registry\nworkflows based on standardized CanReg-style data structures\nand helps make registry analyses more reproducible and\nconsistent.",
  "License": "MIT + file LICENSE",
  "URL": "https://github.com/gigu003/canregtools,\nhttps://gigu003.github.io/canregtools/,\nhttps://canregtools.chenq.site",
  "BugReports": "https://github.com/gigu003/canregtools/issues",
  "Date": "2026-06-18",
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  "Encoding": "UTF-8",
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  "Repository": "https://gigu003.r-universe.dev",
  "Date/Publication": "2026-07-31 13:49:42 UTC",
  "RemoteUrl": "https://github.com/gigu003/canregtools",
  "RemoteRef": "HEAD",
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  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-18 09:49:05 UTC",
    "User": "root"
  },
  "Author": "Qiong Chen [aut, cre, cph] (ORCID:\n<https://orcid.org/0000-0003-2401-0046>, affiliation: Department of\nCancer Epidemiology, The Affiliated Cancer Hospital of Zhengzhou\nUniversity & Henan Cancer Hospital, Henan Cancer Registry in China)",
  "Maintainer": "Qiong Chen <chenq08@126.com>",
  "_user": "gigu003",
  "_type": "src",
  "_file": "canregtools_0.2.11.tar.gz",
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  "_sha256": "fd7f21daf08e3a5ce16e3f84ff88a1e29bf3828708744913e9591780e48f1fba",
  "_expires": "2027-01-26T09:52:32.000Z",
  "_created": "2026-10-18T09:49:05.000Z",
  "_published": "2026-10-18T09:52:34.075Z",
  "_buildurl": "https://github.com/r-universe/gigu003/actions/runs/39116658273",
  "_status": "success",
  "_host": "GitHub-Actions",
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  "_tags": [],
  "_topics": [
    "cancer-epidemiology",
    "cancer-registration",
    "statistical-analysis",
    "visualization"
  ],
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  "_contributors": [
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    "extra/readme.md",
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  "_exports": [
    "add_labels",
    "add_var_labels",
    "ageadjust",
    "as_canreg",
    "calc_age",
    "calc_ax",
    "classify_areacode",
    "classify_childhood",
    "classify_icd10",
    "classify_morp",
    "classify_topo",
    "combine_tp",
    "count_canreg",
    "cr_clean",
    "cr_filter",
    "cr_merge",
    "cr_reframe",
    "cr_rename",
    "cr_select",
    "create_age_rate",
    "create_asr",
    "create_canreg_report_data",
    "create_quality",
    "create_report",
    "create_site_morp",
    "cumrate",
    "cumrisk",
    "cutage",
    "del_dict_files",
    "draw_barchart",
    "draw_dumbbell",
    "draw_linechart",
    "draw_pyramid",
    "drop_others",
    "drop_total",
    "esti_fbswicd",
    "esti_pop",
    "expand_age_pop",
    "expand_lx",
    "get_pop",
    "get_stdpop",
    "ls_attrs",
    "ls_dict",
    "ls_dict_files",
    "ls_vars",
    "lt",
    "new_canreg_report",
    "read_canreg",
    "tidy_age",
    "tidy_sex",
    "tidy_var",
    "truncrate",
    "validate_canreg_report",
    "write_areacode",
    "write_registry"
  ],
  "_datasets": [
    {
      "name": "canregs",
      "title": "Example Population-Based Cancer Registry Data ('canregs')",
      "object": "canregs",
      "class": [
        "canregs",
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "quality",
      "title": "Quality Indicators from the China Cancer Registry Annual Report",
      "object": "quality",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "year",
        "area_type",
        "cancer",
        "mv",
        "dco",
        "mi"
      ],
      "rows": 168,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "add_labels",
      "title": "Add variable labels for data set.",
      "topics": [
        "add_labels"
      ]
    },
    {
      "page": "add_var_labels",
      "title": "Add Variable Labels with Units",
      "topics": [
        "add_var_labels"
      ]
    },
    {
      "page": "ageadjust",
      "title": "Calculate the age standardized rate using the direct method",
      "topics": [
        "ageadjust"
      ]
    },
    {
      "page": "as_canreg",
      "title": "Construct a canreg object",
      "topics": [
        "as_canreg"
      ]
    },
    {
      "page": "calc_age",
      "title": "Calculate the actual age in completed years between two dates",
      "topics": [
        "calc_age"
      ]
    },
    {
      "page": "calc_ax",
      "title": "Calculate ax for life table",
      "topics": [
        "calc_ax"
      ]
    },
    {
      "page": "canregs",
      "title": "Example Population-Based Cancer Registry Data ('canregs')",
      "topics": [
        "canregs"
      ]
    },
    {
      "page": "classify_areacode",
      "title": "Classify codes for the administrative divisions of China",
      "topics": [
        "classify_areacode"
      ]
    },
    {
      "page": "classify_childhood",
      "title": "Classify childhood cancer according to the ICCC3 standards",
      "topics": [
        "classify_childhood"
      ]
    },
    {
      "page": "classify_icd10",
      "title": "Classify ICD10 codes to cancer categories",
      "topics": [
        "classify_icd10"
      ]
    },
    {
      "page": "classify_morp",
      "title": "Classify ICD-O-3 morphology codes into categories",
      "topics": [
        "classify_morp"
      ]
    },
    {
      "page": "classify_topo",
      "title": "Classify ICD-O-3 topography codes into categories",
      "topics": [
        "classify_topo"
      ]
    },
    {
      "page": "combine_tp",
      "title": "Sum named numeric vectors",
      "topics": [
        "combine_tp"
      ]
    },
    {
      "page": "count_canreg",
      "title": "Count and classify 'canreg' data",
      "topics": [
        "count_canreg",
        "count_canreg.canreg",
        "count_canreg.canregs"
      ]
    },
    {
      "page": "cr_clean",
      "title": "Clean canreg data.",
      "topics": [
        "cr_clean",
        "cr_clean.canreg",
        "cr_clean.canregs",
        "cr_clean.FBcases",
        "cr_clean.POP",
        "cr_clean.SWcases"
      ]
    },
    {
      "page": "cr_filter",
      "title": "Filter rows from canregtools objects",
      "topics": [
        "cr_filter",
        "cr_filter.age_rates",
        "cr_filter.asrs",
        "cr_filter.canreg",
        "cr_filter.canregs",
        "cr_filter.default",
        "cr_filter.fbswicd",
        "cr_filter.fbswicds",
        "cr_filter.qualities"
      ]
    },
    {
      "page": "cr_merge",
      "title": "Merge elements from objects of class 'canregs', 'fbswicds', or 'asrs'",
      "topics": [
        "cr_merge",
        "cr_merge.age_rates",
        "cr_merge.asrs",
        "cr_merge.canregs",
        "cr_merge.checks",
        "cr_merge.fbswicds",
        "cr_merge.qualities",
        "cr_merge.site_morps",
        "cr_merge.summaries"
      ]
    },
    {
      "page": "cr_reframe",
      "title": "Reframe data of class canregs or fbswicds",
      "topics": [
        "cr_reframe",
        "cr_reframe.canregs",
        "cr_reframe.fbswicds"
      ]
    },
    {
      "page": "cr_rename",
      "title": "Rename registries in a 'canregs' object",
      "topics": [
        "cr_rename",
        "cr_rename.canregs"
      ]
    },
    {
      "page": "cr_select",
      "title": "Select elements from objects with class '\"canregs\"', or '\"fbswicds\"'",
      "topics": [
        "cr_select",
        "cr_select.age_rates",
        "cr_select.asrs",
        "cr_select.canregs",
        "cr_select.fbswicds",
        "cr_select.summaries"
      ]
    },
    {
      "page": "create_age_rate",
      "title": "Calculate age specific rate",
      "topics": [
        "create_age_rate",
        "create_age_rate.canreg",
        "create_age_rate.canregs",
        "create_age_rate.fbswicd",
        "create_age_rate.fbswicds"
      ]
    },
    {
      "page": "create_asr",
      "title": "Calculate age-standardized rate (ASR)",
      "topics": [
        "create_asr",
        "create_asr.canreg",
        "create_asr.canregs",
        "create_asr.fbswicd",
        "create_asr.fbswicds"
      ]
    },
    {
      "page": "create_canreg_report_data",
      "title": "Create a standardized cancer registry report data object",
      "topics": [
        "create_canreg_report_data"
      ]
    },
    {
      "page": "create_quality",
      "title": "Calculate quality indicators",
      "topics": [
        "create_quality",
        "create_quality.canreg",
        "create_quality.canregs",
        "create_quality.fbswicd",
        "create_quality.fbswicds"
      ]
    },
    {
      "page": "create_report",
      "title": "Render standardized cancer registry reports from built-in templates",
      "topics": [
        "create_report",
        "create_report.canreg",
        "create_report.canregs"
      ]
    },
    {
      "page": "create_site_morp",
      "title": "Count ICD-10 site and morphology groups by strata",
      "topics": [
        "create_site_morp",
        "create_site_morp.canreg",
        "create_site_morp.canregs",
        "create_site_morp.fbswicd",
        "create_site_morp.fbswicds"
      ]
    },
    {
      "page": "cumrate",
      "title": "Calculate the cumulative incidence or mortality rate",
      "topics": [
        "cumrate"
      ]
    },
    {
      "page": "cumrisk",
      "title": "Calculate the cumulative risk",
      "topics": [
        "cumrisk"
      ]
    },
    {
      "page": "cutage",
      "title": "Group ages into categories",
      "topics": [
        "cutage"
      ]
    },
    {
      "page": "del_dict_files",
      "title": "Delete a dictionary file from canregtools config",
      "topics": [
        "del_dict_files"
      ]
    },
    {
      "page": "draw_barchart",
      "title": "Draw Grouped Bar Charts with Facets",
      "topics": [
        "draw_barchart"
      ]
    },
    {
      "page": "draw_dumbbell",
      "title": "Plot dumbbell chart",
      "topics": [
        "draw_dumbbell"
      ]
    },
    {
      "page": "draw_linechart",
      "title": "Draw a Custom Line Chart Using Base R",
      "topics": [
        "draw_linechart"
      ]
    },
    {
      "page": "draw_pyramid",
      "title": "Plot a population pyramid",
      "topics": [
        "draw_pyramid"
      ]
    },
    {
      "page": "drop_others",
      "title": "Drop “other” cancer codes",
      "topics": [
        "drop_others"
      ]
    },
    {
      "page": "drop_total",
      "title": "Drop the total cancer",
      "topics": [
        "drop_total"
      ]
    },
    {
      "page": "esti_fbswicd",
      "title": "Estimate object of fbswicd",
      "topics": [
        "esti_fbswicd"
      ]
    },
    {
      "page": "esti_pop",
      "title": "Estimating population structure using interpolation method.",
      "topics": [
        "esti_pop"
      ]
    },
    {
      "page": "expand_age_pop",
      "title": "Expand population data from 5-year age groups to single-year ages",
      "topics": [
        "expand_age_pop"
      ]
    },
    {
      "page": "expand_lx",
      "title": "Expand a five-year abridged life table to a complete life table",
      "topics": [
        "expand_lx"
      ]
    },
    {
      "page": "get_pop",
      "title": "Subset or summarize population data",
      "topics": [
        "get_pop",
        "get_pop.canreg",
        "get_pop.canregs",
        "get_pop.fbswicd",
        "get_pop.fbswicds"
      ]
    },
    {
      "page": "get_stdpop",
      "title": "Get standardized population data",
      "topics": [
        "get_stdpop"
      ]
    },
    {
      "page": "ls_attrs",
      "title": "list built-in attributes name used in 'cr_reframe()'",
      "topics": [
        "ls_attrs"
      ]
    },
    {
      "page": "ls_dict",
      "title": "list dictionary used in package",
      "topics": [
        "ls_dict"
      ]
    },
    {
      "page": "ls_dict_files",
      "title": "List dictionary files used by canregtools",
      "topics": [
        "ls_dict_files"
      ]
    },
    {
      "page": "ls_vars",
      "title": "List variable names and their descriptions by category",
      "topics": [
        "ls_vars"
      ]
    },
    {
      "page": "lt",
      "title": "Construct a life table from age-specific mortality rates",
      "topics": [
        "lt"
      ]
    },
    {
      "page": "new_canreg_report",
      "title": "Construct a 'canreg_report' object",
      "topics": [
        "new_canreg_report"
      ]
    },
    {
      "page": "quality",
      "title": "Quality Indicators from the China Cancer Registry Annual Report",
      "topics": [
        "quality"
      ]
    },
    {
      "page": "read_canreg",
      "title": "Read cancer registration data",
      "topics": [
        "read_canreg"
      ]
    },
    {
      "page": "summary",
      "title": "Summary object of class 'canreg'",
      "topics": [
        "summary.canreg",
        "summary.canregs"
      ]
    },
    {
      "page": "tidy_age",
      "title": "Tidy age description",
      "topics": [
        "tidy_age"
      ]
    },
    {
      "page": "tidy_sex",
      "title": "Tidy gender variable",
      "topics": [
        "tidy_sex"
      ]
    },
    {
      "page": "tidy_var",
      "title": "Reformat variable values for Cancer Registration in China",
      "topics": [
        "tidy_var"
      ]
    },
    {
      "page": "truncrate",
      "title": "Calculate truncated age standardized rate",
      "topics": [
        "truncrate"
      ]
    },
    {
      "page": "validate_canreg_report",
      "title": "Validate a 'canreg_report' object",
      "topics": [
        "validate_canreg_report"
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    },
    {
      "page": "write_areacode",
      "title": "Write custom six-digit administrative division codes to dictionary",
      "topics": [
        "write_areacode"
      ]
    },
    {
      "page": "write_registry",
      "title": "Write registry attributes to a user-defined dictionary",
      "topics": [
        "write_registry",
        "write_registry.character",
        "write_registry.data.frame",
        "write_registry.list",
        "write_registry.NULL"
      ]
    }
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  "_pkglogo": "https://github.com/gigu003/canregtools/raw/HEAD/man/figures/logo.png",
  "_readme": "https://github.com/gigu003/canregtools/raw/HEAD/README.md",
  "_rundeps": [
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